All Non-Coding Repeats of Acidithiobacillus caldus SM-1 plasmid pLAtc3
Total Repeats: 133
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_015854 | CCT | 2 | 6 | 56 | 61 | 0 % | 33.33 % | 0 % | 66.67 % | Non-Coding |
2 | NC_015854 | GCAC | 2 | 8 | 71 | 78 | 25 % | 0 % | 25 % | 50 % | Non-Coding |
3 | NC_015854 | AAGGCG | 2 | 12 | 106 | 117 | 33.33 % | 0 % | 50 % | 16.67 % | Non-Coding |
4 | NC_015854 | GCAC | 2 | 8 | 132 | 139 | 25 % | 0 % | 25 % | 50 % | Non-Coding |
5 | NC_015854 | GCAC | 2 | 8 | 193 | 200 | 25 % | 0 % | 25 % | 50 % | Non-Coding |
6 | NC_015854 | ACA | 2 | 6 | 217 | 222 | 66.67 % | 0 % | 0 % | 33.33 % | Non-Coding |
7 | NC_015854 | ACC | 2 | 6 | 258 | 263 | 33.33 % | 0 % | 0 % | 66.67 % | Non-Coding |
8 | NC_015854 | T | 6 | 6 | 266 | 271 | 0 % | 100 % | 0 % | 0 % | Non-Coding |
9 | NC_015854 | ACCC | 2 | 8 | 272 | 279 | 25 % | 0 % | 0 % | 75 % | Non-Coding |
10 | NC_015854 | CTGC | 2 | 8 | 284 | 291 | 0 % | 25 % | 25 % | 50 % | Non-Coding |
11 | NC_015854 | C | 6 | 6 | 341 | 346 | 0 % | 0 % | 0 % | 100 % | Non-Coding |
12 | NC_015854 | CCG | 2 | 6 | 419 | 424 | 0 % | 0 % | 33.33 % | 66.67 % | Non-Coding |
13 | NC_015854 | GGT | 2 | 6 | 2924 | 2929 | 0 % | 33.33 % | 66.67 % | 0 % | Non-Coding |
14 | NC_015854 | AGA | 2 | 6 | 3006 | 3011 | 66.67 % | 0 % | 33.33 % | 0 % | Non-Coding |
15 | NC_015854 | TCT | 2 | 6 | 3070 | 3075 | 0 % | 66.67 % | 0 % | 33.33 % | Non-Coding |
16 | NC_015854 | T | 6 | 6 | 3075 | 3080 | 0 % | 100 % | 0 % | 0 % | Non-Coding |
17 | NC_015854 | AACC | 2 | 8 | 3095 | 3102 | 50 % | 0 % | 0 % | 50 % | Non-Coding |
18 | NC_015854 | ACC | 2 | 6 | 3129 | 3134 | 33.33 % | 0 % | 0 % | 66.67 % | Non-Coding |
19 | NC_015854 | ACC | 2 | 6 | 3213 | 3218 | 33.33 % | 0 % | 0 % | 66.67 % | Non-Coding |
20 | NC_015854 | CGG | 2 | 6 | 3332 | 3337 | 0 % | 0 % | 66.67 % | 33.33 % | Non-Coding |
21 | NC_015854 | CG | 3 | 6 | 3498 | 3503 | 0 % | 0 % | 50 % | 50 % | Non-Coding |
22 | NC_015854 | GAA | 2 | 6 | 3707 | 3712 | 66.67 % | 0 % | 33.33 % | 0 % | Non-Coding |
23 | NC_015854 | CAT | 2 | 6 | 3744 | 3749 | 33.33 % | 33.33 % | 0 % | 33.33 % | Non-Coding |
24 | NC_015854 | GCCTC | 2 | 10 | 3753 | 3762 | 0 % | 20 % | 20 % | 60 % | Non-Coding |
25 | NC_015854 | GTT | 2 | 6 | 3802 | 3807 | 0 % | 66.67 % | 33.33 % | 0 % | Non-Coding |
26 | NC_015854 | GTT | 2 | 6 | 3814 | 3819 | 0 % | 66.67 % | 33.33 % | 0 % | Non-Coding |
27 | NC_015854 | CTG | 2 | 6 | 3826 | 3831 | 0 % | 33.33 % | 33.33 % | 33.33 % | Non-Coding |
28 | NC_015854 | CAGAGG | 2 | 12 | 3885 | 3896 | 33.33 % | 0 % | 50 % | 16.67 % | Non-Coding |
29 | NC_015854 | ACC | 2 | 6 | 3912 | 3917 | 33.33 % | 0 % | 0 % | 66.67 % | Non-Coding |
30 | NC_015854 | AGA | 2 | 6 | 3927 | 3932 | 66.67 % | 0 % | 33.33 % | 0 % | Non-Coding |
31 | NC_015854 | GCAGC | 2 | 10 | 3981 | 3990 | 20 % | 0 % | 40 % | 40 % | Non-Coding |
32 | NC_015854 | GAC | 2 | 6 | 4009 | 4014 | 33.33 % | 0 % | 33.33 % | 33.33 % | Non-Coding |
33 | NC_015854 | CAGAA | 2 | 10 | 4025 | 4034 | 60 % | 0 % | 20 % | 20 % | Non-Coding |
34 | NC_015854 | G | 6 | 6 | 6927 | 6932 | 0 % | 0 % | 100 % | 0 % | Non-Coding |
35 | NC_015854 | GCC | 2 | 6 | 7024 | 7029 | 0 % | 0 % | 33.33 % | 66.67 % | Non-Coding |
36 | NC_015854 | AGC | 2 | 6 | 7030 | 7035 | 33.33 % | 0 % | 33.33 % | 33.33 % | Non-Coding |
37 | NC_015854 | AAT | 2 | 6 | 10308 | 10313 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
38 | NC_015854 | ATG | 2 | 6 | 10320 | 10325 | 33.33 % | 33.33 % | 33.33 % | 0 % | Non-Coding |
39 | NC_015854 | A | 7 | 7 | 10732 | 10738 | 100 % | 0 % | 0 % | 0 % | Non-Coding |
40 | NC_015854 | ATA | 2 | 6 | 11599 | 11604 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
41 | NC_015854 | ATG | 2 | 6 | 11619 | 11624 | 33.33 % | 33.33 % | 33.33 % | 0 % | Non-Coding |
42 | NC_015854 | GAC | 2 | 6 | 12367 | 12372 | 33.33 % | 0 % | 33.33 % | 33.33 % | Non-Coding |
43 | NC_015854 | GAG | 2 | 6 | 12502 | 12507 | 33.33 % | 0 % | 66.67 % | 0 % | Non-Coding |
44 | NC_015854 | GCC | 2 | 6 | 12526 | 12531 | 0 % | 0 % | 33.33 % | 66.67 % | Non-Coding |
45 | NC_015854 | GACCGA | 2 | 12 | 12544 | 12555 | 33.33 % | 0 % | 33.33 % | 33.33 % | Non-Coding |
46 | NC_015854 | GTG | 2 | 6 | 12563 | 12568 | 0 % | 33.33 % | 66.67 % | 0 % | Non-Coding |
47 | NC_015854 | AGA | 2 | 6 | 12577 | 12582 | 66.67 % | 0 % | 33.33 % | 0 % | Non-Coding |
48 | NC_015854 | CCA | 2 | 6 | 12595 | 12600 | 33.33 % | 0 % | 0 % | 66.67 % | Non-Coding |
49 | NC_015854 | AGG | 2 | 6 | 12865 | 12870 | 33.33 % | 0 % | 66.67 % | 0 % | Non-Coding |
50 | NC_015854 | A | 6 | 6 | 13064 | 13069 | 100 % | 0 % | 0 % | 0 % | Non-Coding |
51 | NC_015854 | TAC | 2 | 6 | 13091 | 13096 | 33.33 % | 33.33 % | 0 % | 33.33 % | Non-Coding |
52 | NC_015854 | ACC | 2 | 6 | 13101 | 13106 | 33.33 % | 0 % | 0 % | 66.67 % | Non-Coding |
53 | NC_015854 | CGG | 2 | 6 | 13143 | 13148 | 0 % | 0 % | 66.67 % | 33.33 % | Non-Coding |
54 | NC_015854 | GTG | 2 | 6 | 13166 | 13171 | 0 % | 33.33 % | 66.67 % | 0 % | Non-Coding |
55 | NC_015854 | TCC | 2 | 6 | 13678 | 13683 | 0 % | 33.33 % | 0 % | 66.67 % | Non-Coding |
56 | NC_015854 | CAGG | 2 | 8 | 13725 | 13732 | 25 % | 0 % | 50 % | 25 % | Non-Coding |
57 | NC_015854 | TGGT | 2 | 8 | 13736 | 13743 | 0 % | 50 % | 50 % | 0 % | Non-Coding |
58 | NC_015854 | CTGGG | 2 | 10 | 13752 | 13761 | 0 % | 20 % | 60 % | 20 % | Non-Coding |
59 | NC_015854 | GCT | 2 | 6 | 13841 | 13846 | 0 % | 33.33 % | 33.33 % | 33.33 % | Non-Coding |
60 | NC_015854 | CGG | 2 | 6 | 13909 | 13914 | 0 % | 0 % | 66.67 % | 33.33 % | Non-Coding |
61 | NC_015854 | GGT | 2 | 6 | 13958 | 13963 | 0 % | 33.33 % | 66.67 % | 0 % | Non-Coding |
62 | NC_015854 | GCT | 2 | 6 | 13964 | 13969 | 0 % | 33.33 % | 33.33 % | 33.33 % | Non-Coding |
63 | NC_015854 | CTT | 2 | 6 | 13997 | 14002 | 0 % | 66.67 % | 0 % | 33.33 % | Non-Coding |
64 | NC_015854 | TGC | 2 | 6 | 14039 | 14044 | 0 % | 33.33 % | 33.33 % | 33.33 % | Non-Coding |
65 | NC_015854 | GC | 3 | 6 | 14046 | 14051 | 0 % | 0 % | 50 % | 50 % | Non-Coding |
66 | NC_015854 | TCT | 2 | 6 | 14107 | 14112 | 0 % | 66.67 % | 0 % | 33.33 % | Non-Coding |
67 | NC_015854 | T | 6 | 6 | 14122 | 14127 | 0 % | 100 % | 0 % | 0 % | Non-Coding |
68 | NC_015854 | GCG | 2 | 6 | 14187 | 14192 | 0 % | 0 % | 66.67 % | 33.33 % | Non-Coding |
69 | NC_015854 | AAAG | 2 | 8 | 14200 | 14207 | 75 % | 0 % | 25 % | 0 % | Non-Coding |
70 | NC_015854 | CAT | 2 | 6 | 14238 | 14243 | 33.33 % | 33.33 % | 0 % | 33.33 % | Non-Coding |
71 | NC_015854 | TCC | 2 | 6 | 14638 | 14643 | 0 % | 33.33 % | 0 % | 66.67 % | Non-Coding |
72 | NC_015854 | CGA | 2 | 6 | 14678 | 14683 | 33.33 % | 0 % | 33.33 % | 33.33 % | Non-Coding |
73 | NC_015854 | GGC | 2 | 6 | 14715 | 14720 | 0 % | 0 % | 66.67 % | 33.33 % | Non-Coding |
74 | NC_015854 | TGG | 2 | 6 | 14762 | 14767 | 0 % | 33.33 % | 66.67 % | 0 % | Non-Coding |
75 | NC_015854 | CTG | 2 | 6 | 14813 | 14818 | 0 % | 33.33 % | 33.33 % | 33.33 % | Non-Coding |
76 | NC_015854 | ATT | 2 | 6 | 15278 | 15283 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
77 | NC_015854 | GC | 3 | 6 | 15293 | 15298 | 0 % | 0 % | 50 % | 50 % | Non-Coding |
78 | NC_015854 | AGA | 2 | 6 | 18193 | 18198 | 66.67 % | 0 % | 33.33 % | 0 % | Non-Coding |
79 | NC_015854 | CAG | 2 | 6 | 18943 | 18948 | 33.33 % | 0 % | 33.33 % | 33.33 % | Non-Coding |
80 | NC_015854 | TGAT | 2 | 8 | 19002 | 19009 | 25 % | 50 % | 25 % | 0 % | Non-Coding |
81 | NC_015854 | TA | 3 | 6 | 19048 | 19053 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
82 | NC_015854 | AAG | 2 | 6 | 19061 | 19066 | 66.67 % | 0 % | 33.33 % | 0 % | Non-Coding |
83 | NC_015854 | TGG | 2 | 6 | 19079 | 19084 | 0 % | 33.33 % | 66.67 % | 0 % | Non-Coding |
84 | NC_015854 | TGC | 2 | 6 | 19146 | 19151 | 0 % | 33.33 % | 33.33 % | 33.33 % | Non-Coding |
85 | NC_015854 | AAC | 2 | 6 | 19203 | 19208 | 66.67 % | 0 % | 0 % | 33.33 % | Non-Coding |
86 | NC_015854 | GA | 3 | 6 | 19218 | 19223 | 50 % | 0 % | 50 % | 0 % | Non-Coding |
87 | NC_015854 | CATC | 2 | 8 | 19268 | 19275 | 25 % | 25 % | 0 % | 50 % | Non-Coding |
88 | NC_015854 | CAC | 2 | 6 | 19279 | 19284 | 33.33 % | 0 % | 0 % | 66.67 % | Non-Coding |
89 | NC_015854 | TAT | 2 | 6 | 19289 | 19294 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
90 | NC_015854 | AGG | 2 | 6 | 19330 | 19335 | 33.33 % | 0 % | 66.67 % | 0 % | Non-Coding |
91 | NC_015854 | CAA | 2 | 6 | 22900 | 22905 | 66.67 % | 0 % | 0 % | 33.33 % | Non-Coding |
92 | NC_015854 | T | 6 | 6 | 22922 | 22927 | 0 % | 100 % | 0 % | 0 % | Non-Coding |
93 | NC_015854 | A | 6 | 6 | 22939 | 22944 | 100 % | 0 % | 0 % | 0 % | Non-Coding |
94 | NC_015854 | CGA | 2 | 6 | 22961 | 22966 | 33.33 % | 0 % | 33.33 % | 33.33 % | Non-Coding |
95 | NC_015854 | AGT | 2 | 6 | 23005 | 23010 | 33.33 % | 33.33 % | 33.33 % | 0 % | Non-Coding |
96 | NC_015854 | TCG | 2 | 6 | 23045 | 23050 | 0 % | 33.33 % | 33.33 % | 33.33 % | Non-Coding |
97 | NC_015854 | GCG | 3 | 9 | 23109 | 23117 | 0 % | 0 % | 66.67 % | 33.33 % | Non-Coding |
98 | NC_015854 | TGT | 2 | 6 | 23308 | 23313 | 0 % | 66.67 % | 33.33 % | 0 % | Non-Coding |
99 | NC_015854 | AAGAT | 2 | 10 | 23329 | 23338 | 60 % | 20 % | 20 % | 0 % | Non-Coding |
100 | NC_015854 | CCA | 2 | 6 | 25020 | 25025 | 33.33 % | 0 % | 0 % | 66.67 % | Non-Coding |
101 | NC_015854 | ATG | 2 | 6 | 25034 | 25039 | 33.33 % | 33.33 % | 33.33 % | 0 % | Non-Coding |
102 | NC_015854 | CA | 3 | 6 | 25042 | 25047 | 50 % | 0 % | 0 % | 50 % | Non-Coding |
103 | NC_015854 | ACA | 2 | 6 | 25998 | 26003 | 66.67 % | 0 % | 0 % | 33.33 % | Non-Coding |
104 | NC_015854 | AT | 3 | 6 | 26033 | 26038 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
105 | NC_015854 | TA | 3 | 6 | 26052 | 26057 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
106 | NC_015854 | TAA | 3 | 9 | 26059 | 26067 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
107 | NC_015854 | TAGA | 2 | 8 | 26072 | 26079 | 50 % | 25 % | 25 % | 0 % | Non-Coding |
108 | NC_015854 | TAA | 2 | 6 | 26086 | 26091 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
109 | NC_015854 | GCC | 2 | 6 | 26111 | 26116 | 0 % | 0 % | 33.33 % | 66.67 % | Non-Coding |
110 | NC_015854 | ACC | 2 | 6 | 26254 | 26259 | 33.33 % | 0 % | 0 % | 66.67 % | Non-Coding |
111 | NC_015854 | GGT | 3 | 9 | 26269 | 26277 | 0 % | 33.33 % | 66.67 % | 0 % | Non-Coding |
112 | NC_015854 | GCA | 2 | 6 | 26286 | 26291 | 33.33 % | 0 % | 33.33 % | 33.33 % | Non-Coding |
113 | NC_015854 | CAC | 2 | 6 | 26318 | 26323 | 33.33 % | 0 % | 0 % | 66.67 % | Non-Coding |
114 | NC_015854 | CGTG | 2 | 8 | 26437 | 26444 | 0 % | 25 % | 50 % | 25 % | Non-Coding |
115 | NC_015854 | GC | 3 | 6 | 26448 | 26453 | 0 % | 0 % | 50 % | 50 % | Non-Coding |
116 | NC_015854 | TC | 3 | 6 | 26456 | 26461 | 0 % | 50 % | 0 % | 50 % | Non-Coding |
117 | NC_015854 | CCCA | 2 | 8 | 26471 | 26478 | 25 % | 0 % | 0 % | 75 % | Non-Coding |
118 | NC_015854 | CTG | 2 | 6 | 26536 | 26541 | 0 % | 33.33 % | 33.33 % | 33.33 % | Non-Coding |
119 | NC_015854 | TGG | 2 | 6 | 26545 | 26550 | 0 % | 33.33 % | 66.67 % | 0 % | Non-Coding |
120 | NC_015854 | C | 7 | 7 | 27877 | 27883 | 0 % | 0 % | 0 % | 100 % | Non-Coding |
121 | NC_015854 | C | 7 | 7 | 27892 | 27898 | 0 % | 0 % | 0 % | 100 % | Non-Coding |
122 | NC_015854 | GGT | 2 | 6 | 27958 | 27963 | 0 % | 33.33 % | 66.67 % | 0 % | Non-Coding |
123 | NC_015854 | CTT | 2 | 6 | 28016 | 28021 | 0 % | 66.67 % | 0 % | 33.33 % | Non-Coding |
124 | NC_015854 | AGG | 2 | 6 | 28126 | 28131 | 33.33 % | 0 % | 66.67 % | 0 % | Non-Coding |
125 | NC_015854 | TGC | 2 | 6 | 28170 | 28175 | 0 % | 33.33 % | 33.33 % | 33.33 % | Non-Coding |
126 | NC_015854 | GGTC | 2 | 8 | 28259 | 28266 | 0 % | 25 % | 50 % | 25 % | Non-Coding |
127 | NC_015854 | CTTT | 2 | 8 | 28275 | 28282 | 0 % | 75 % | 0 % | 25 % | Non-Coding |
128 | NC_015854 | GGT | 2 | 6 | 28489 | 28494 | 0 % | 33.33 % | 66.67 % | 0 % | Non-Coding |
129 | NC_015854 | CCG | 2 | 6 | 28583 | 28588 | 0 % | 0 % | 33.33 % | 66.67 % | Non-Coding |
130 | NC_015854 | CGC | 2 | 6 | 28594 | 28599 | 0 % | 0 % | 33.33 % | 66.67 % | Non-Coding |
131 | NC_015854 | TGC | 2 | 6 | 28634 | 28639 | 0 % | 33.33 % | 33.33 % | 33.33 % | Non-Coding |
132 | NC_015854 | ATGCC | 2 | 10 | 28688 | 28697 | 20 % | 20 % | 20 % | 40 % | Non-Coding |
133 | NC_015854 | AGGC | 2 | 8 | 28828 | 28835 | 25 % | 0 % | 50 % | 25 % | Non-Coding |